Publications
Peer-reviewed research spanning biomedical data science, population health genomics, and computational/statistical physics. Full text and DOI links are noted where available.
Biomedical, Genomics & Data Science
Single-Cell Patch-Clamp/Proteomics of Human Alzheimer’s Disease iPSC-Derived Excitatory Neurons Versus Isogenic Wild-Type Controls Suggests Novel Causation and Therapeutic Targets
Ghatak S, Diedrich JK, Talantova M, Bhadra N, Scott H, Sharma M, et al.
Advanced Science, 2024
Combines single-cell electrophysiology with proteomic profiling of Alzheimer’s-derived neurons to surface candidate disease mechanisms and therapeutic targets not visible from either method alone.
Co-Author Journal Article Neuroscience
Heterogeneity Analysis of Associations Involving the Large-Scale Online MindCrowd Survey Memory Test
Bhadra N, Don J, De Both M, Johnson M, Sharma S, Chambers D, et al.
Gerontology, 2025;71(10):823–834
Examines how the relationship between memory performance and its predictors varies across subgroups in a large online cognitive testing cohort, arguing against one-size-fits-all models of memory decline.
First Author Journal Article Cognitive Aging
T55. Genetic Heterogeneity Across ASD, ADHD, and IV
Georgii Hellberg IK-L, Østerby Sørensen J, Bhadra N, et al.
European Neuropsychopharmacology, 2025 — Conference Abstract
Investigates shared and distinct genetic contributions across autism spectrum disorder, ADHD, and a third diagnostic category, presented as a conference abstract.
Co-Author Conference Abstract Genomics
Predicting Individual Responses in Phase I Oncology Trials Using Routinely Collected Clinical Biomarkers
Bhadra N, Boyd M, Smith S, Espirito J, Trent J, Powell C, Koktavy K, et al.
2024
Builds predictive models of individual patient response in early-phase oncology trials from biomarkers already collected in routine clinical care, aimed at supporting trial design and patient stratification.
First Author Journal Article Oncology
A Time-Series Analysis of Blood-Based Biomarkers Within a 25-Year Longitudinal Dolphin Cohort
Rangan AV, McGrouther CC, Bhadra N, Venn-Watson S, Jensen ED, et al.
PLOS Computational Biology, 2023;19(2):e1010890
Uses time-series methods on a quarter-century of blood biomarker data from a longitudinal dolphin cohort to model long-term physiological trends, with implications for comparative aging research.
Co-Author Journal Article Time-Series
Multiclass Classification of Environmental Chemical Stimuli From Unbalanced Plant Electrophysiological Data
Bhadra N, Chatterjee SK, Das S.
PLoS One, 2023;18(5):e0285321
Develops a classification approach for identifying environmental chemical stimuli from plant electrophysiological signals, addressing the class-imbalance challenges typical of this kind of biological sensing data.
First Author Journal Article Machine Learning
Cross-Domain Affective Analysis of Large-Scale Textual Data Using Transformer-Based NLP Models
Bhadra N.
Master of Engineering thesis, Arcada University of Applied Sciences, 2025
MEng thesis applying transformer-based NLP models to affective analysis across multiple textual domains. Full project write-up available on this site.
First Author Thesis NLP
Computational & Statistical Physics
Aspects of Temporal Perturbation in Dynamical Systems
Bhadra N.
PhD thesis, IISER Kolkata, 2019
PhD thesis studying how time-dependent perturbations affect the behavior of dynamical systems, spanning several coupled and driven physical models. Full project write-up available on this site.
First Author Thesis Dynamical Systems
Dynamical Systems Analysis of Phantom Dark Energy Models
Roy N, Bhadra N.
Journal of Cosmology and Astroparticle Physics, 2018
Applies dynamical systems techniques to phantom dark energy cosmological models to characterize their long-term stability and behavior.
Co-Author Journal Article Cosmology
Hamiltonian Mean-Field Model: Effect of Temporal Perturbation in Coupling Matrix
Bhadra N, Patra SK.
Modern Physics Letters B, 2018;32:1850147
Studies how time-varying perturbations in the coupling matrix of the Hamiltonian Mean-Field model alter its collective dynamics.
First Author Journal Article Statistical Physics
Noise Induced Transition in Josephson Junction With Second Harmonic
Bhadra N.
The European Physical Journal B, 2018;91(1):13
Examines how noise drives transitions between dynamical states in a Josephson junction model that includes a second-harmonic coupling term.
First Author Journal Article Nonlinear Dynamics
Dynamics of a System of Coupled Inverted Pendula With Vertical Forcing
Bhadra N, Banerjee S.
Chaos, Solitons & Fractals, 2020;141:110358
Analyzes the dynamics of coupled inverted pendula under vertical forcing, identifying regimes of stability and synchronization in the coupled system.
First Author Journal Article Nonlinear Dynamics
Effect of Noise and Quantum Fluctuation on Josephson Junction Model With Second Harmonic
Bhadra N, Lal S.
Conference on Nonlinear Systems & Dynamics, IISER Kolkata, 2016;16:18
Extends the Josephson junction analysis to include quantum fluctuations alongside classical noise, presented at IISER Kolkata’s nonlinear systems conference.
Co-Author Conference Abstract Quantum Dynamics